Publications
1.郑儒永, 胡复眉. 1964. 中国毛霉目(Mucorales) 的分类. I. 笄霉科（Choanephoraceae）. 植物分类学报 9: 13-30.
2. 郑儒永, 陈桂清. 1978. 中国半内生钩丝壳属的分类研究. II. 半内生钩丝壳属的无性阶段：新属旋梗菌属. 微生物学报 18: 181-188.
3. 郑儒永, 陈桂清. 1979. 中国小钩丝壳属的分类研究. I. 小钩丝壳属的建立以及中国和日本种类的鉴定. 微生物学报 19: 280-291.
4. 郑儒永, 陈桂清. 1979. 中国球钩丝壳属的分类研究. I. 球钩丝壳属的建立. 微生物学报 19:375-378.
5. 郑儒永, 陈桂清. 1980. 中国叉钩丝壳属的分类研究. I. 叉钩丝壳属的确认以及槭科和七叶树科上的新种和新组合. 微生物学报 20: 35-44.
6. Zheng, RY & GQ Chen. 1981. The genus Erysiphe in China. Sydowia 34: 214-327.
7. Zheng , RY. 1984. The genus Brasiliomyces (Erysiphaceae). Mycotaxon 19: 281-289.
8. Zheng, RY. 1985. Genera of the Erysiphaceae. Mycotaxon 22: 209-263.
9. Zheng, RY & GQ Chen. 1986. Blakeslea sinensis sp. nov., a further proof for retaining the genus Blakeslea. Acta Mycologica Sinica, Suppl. I: 40-55.
10. 郑儒永、余永年主编. 1987. ＜中国真菌志. 第一卷. 白粉菌目＞. 科学出版社. 1-552 页.
11. Zheng, RY, GQ Chen & FM Hu. 1988. Monosporous varieties of Syncephalastrum. Mycosystema 1:35-52.
12. Hu, FM, RY Zheng & GQ Chen. 1989. A redelimitation of the species of Pilobolus. Mycosystema 2: 111-133.
13. Zheng, RY & GQ Chen. 1991. A non-thermophilic Rhizomucor causing human primary cutaneous mucormycosis. Mycosystema 4: 45-57.
14. Zhou, ZW, H Huang & RY Zheng. 1991. Base composition of DNA and classification of the Mucorales. Mycosystema 4: 1-14.
15. Zheng, RY & GQ Chen. 1993. Another non-thermophilic Rhizomucor causing human primary cutaneous mucormycosis. Mycosystema 6: 1-12.
16. Zheng, RY & H Jiang. 1995. Rhizomucor endophyticus sp. nov., an endophytic zygomycetes from higher plants. Mycotaxon 56: 455-466.
17. Su, YC, H Huang & RY Zheng. 1999. Systematic relationship of several controversial Cunninghamella taxa inferred from sequence comparison of internal transcribed spacer 2 of ribosomal DNA. Mycological Research 103: 805-810.
18. Huang, H, WM Mao & RY Zheng. 1999. PCR-based restriction fragment length polymorphisms in the region of ribosomal DNA of the genus Cunninghamella. Mycosystema 18: 259-269.
19. Zheng, RY & GQ Chen, 2001. A monograph of Cunninghamella. Mycotaxon 80: 1-75.
20. Liu, XY, H Huang & RY Zheng. 2001. Relationships within Cunninghamella based on sequence analysis of ITS rDNA. Mycotaxon 80: 77-95.
21. Zheng, RY. 2002. Zygorhynchus multiplex, a new species isolated from paddy soil. Mycotaxon 84: 367-378.
22. Zheng, RY & XY Liu. 2005. Actinomucor elegans var. meitauzae, the correct name for A.taiwanensis and Mucor meitauzae (Mucorales, Zygomycota). Nova Hedwigia 80: 419-431.
23. Liu, XY, Huang H & Zheng, RY*. 2008. Delimitation of Rhizopus varieties based on IGS rDNA. Sydowia 60(1) (accepted)
24. Ruyong Zheng* & Xiaoyong Liu. 2009. Taxa of Pilaira (Mucorales, Zygomycota) from China . Nova Hedwigia (2008 accepted, in press) (IF 0.770)
25. Xiaoyong Liu, He Huang & Ruyong Zheng*. 2008. Delimitation of Rhizopus varieties based on IGS rDNA. Sydowia 60 (1) : 93-112. (IF 0.556)
26. Ruyong Zheng,Guiqing Chen, He Huang, and Xiaoyong Liu. 2007(2008). A monograph of Rhizopus. Sydowia 59(2): 273-372.(IF 0.556)
27. Xiaoyong Liu, He Huang & Ruyong Zheng. 2007(2008). Molecular phylogenetic relationships within Rhizopus based on combined analyses of ITS rDNA and pyrG gene sequences. Sydowia 59(2): 235-253.(IF 0.556)
28.Ruyong Zheng, Xiaoyong Liu& Ruoyu Li. 2008(2009) More Rhizomucor causing human mucormycosis from China: R. chlamydosporus sp. nov. Sydowia 61: pp-pp. (in press) (IF 0.556)
29. Ruyong Zheng & Xiaoyong Liu. 2009. Taxa of Pilaira (Mucorales, Zygomycota) from China. Nova Hedwigia 88: 255-267.
